A multi-dataset data-collection strategy produces better diffraction data
Creators
- 1. National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101 (China)
- 2. Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602 (United States)
Description
Theoretical analysis and experimental validation prove that a multi-dataset data-collection strategy produces better diffraction data. The readiness test is a simple and sensitive method for X-ray data-collection system evaluation and a benchmark. A multi-dataset (MDS) data-collection strategy is proposed and analyzed for macromolecular crystal diffraction data acquisition. The theoretical analysis indicated that the MDS strategy can reduce the standard deviation (background noise) of diffraction data compared with the commonly used single-dataset strategy for a fixed X-ray dose. In order to validate the hypothesis experimentally, a data-quality evaluation process, termed a readiness test of the X-ray data-collection system, was developed. The anomalous signals of sulfur atoms in zinc-free insulin crystals were used as the probe to differentiate the quality of data collected using different data-collection strategies. The data-collection results using home-laboratory-based rotating-anode X-ray and synchrotron X-ray systems indicate that the diffraction data collected with the MDS strategy contain more accurate anomalous signals from sulfur atoms than the data collected with a regular data-collection strategy. In addition, the MDS strategy offered more advantages with respect to radiation-damage-sensitive crystals and better usage of rotating-anode as well as synchrotron X-rays
Availability note (English)
Available from http://dx.doi.org/10.1107/S0108767311037469; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3211246Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3211246;
- DOI
- 10.1107/S0108767311037469;
- PII
- S0108767311037469;
Publishing Information
- Journal Title
- Acta Crystallographica. Section A: Foundations of Crystallography
- Journal Volume
- 67
- Journal Issue
- Pt 6
- Journal Page Range
- p. 544-549
- ISSN
- 0108-7673
- CODEN
- ACACEQ
INIS
- Country of Publication
- Denmark
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46069232
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- ANODES; ATOMS; BACKGROUND NOISE; BENCHMARKS; CRYSTALS; DATA ACQUISITION; DIFFRACTION; PROBES; SIGNALS; SULFUR; SYNCHROTRONS; VALIDATION; ZINC
- Descriptors DEC
- ACCELERATORS; COHERENT SCATTERING; CYCLIC ACCELERATORS; DATA PROCESSING; ELECTRODES; ELEMENTS; METALS; NOISE; NONMETALS; PROCESSING; SCATTERING; TESTING
Optional Information
- Copyright
- Copyright (c) Zhi-Jie Liu et al. 2011
- Notes
- PMCID: PMC3211246; PMID: 22011470; PUBLISHER-ID: zm5092; OAI: oai:pubmedcentral.nih.gov:3211246; This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.