Published October 2018 | Version v1
Journal article

Correlated motions of C′–N and Cα–Cβ pairs in protonated and per-deuterated GB3

  • 1. University of Colorado at Denver, Department of Chemistry (United States)
  • 2. University of Colorado at Denver, Department of Mathematics (United States)
  • 3. New York Structural Biology Center (United States)
  • 4. University of Colorado, School of Medicine, Department of Biochemistry and Molecular Genetics (United States)
  • 5. Boston University School of Medicine, Department of Physiology and Biophysics (United States)

Description

We investigated correlated µs-ms time scale motions of neighboring 13C′–15N and 13Cα13Cβ nuclei in both protonated and perdeuterated samples of GB3. The techniques employed, NMR relaxation due to cross-correlated chemical shift modulations, specifically target concerted changes in the isotropic chemical shifts of the two nuclei associated with spatial fluctuations. Field-dependence of the relaxation rates permits identification of the parameters defining the chemical exchange rate constant under the assumption of a two-site exchange. The time scale of motions falls into the intermediate to fast regime (with respect to the chemical shift time scale, 100–400 s−1 range) for the 13C′–15N pairs and into the slow to intermediate regime for the 13Cα13Cβ pairs (about 150 s−1). Comparison of the results obtained for protonated and deuterated GB3 suggests that deuteration has a tendency to reduce these slow scale correlated motions, especially for the 13Cα13Cβ pairs.

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
72
Journal Issue
1-2
Journal Page Range
p. 39-54
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
49099997
Subject category
S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
Descriptors DEI
CARBON 13; CHEMICAL SHIFT; NUCLEAR MAGNETIC RESONANCE; REACTION KINETICS
Descriptors DEC
CARBON ISOTOPES; EVEN-ODD NUCLEI; ISOTOPES; KINETICS; LIGHT NUCLEI; MAGNETIC RESONANCE; NUCLEI; RESONANCE; STABLE ISOTOPES

Optional Information

Copyright
Copyright (c) 2018 Springer Nature B.V.