Published March 2019 | Version v1
Journal article

Life in crowded conditions

  • 1. Institute for Nonlinear Dynamics, University of Göttingen (Germany)

Description

Molecular crowding is ubiquitous in cells, which are rather densely packed with macromolecules. The effects of such crowded conditions on biophysical processes can be complex and puzzling. Here, we review these effects in a step-by-step manner. We start with excluded volume effects on elementary physical processes: diffusion, binding, reactions, and polymer compaction. We then discuss the binding of a transcription factor to a binding site on DNA as an example of a more complex process and consider effects of attractive interactions and active processes. We also give an outlook to larger-scale crowded systems such as suspensions of cells, biofilms, and tissues, which can be described using similar approaches as molecular crowded systems.

Additional details

Identifiers

Publishing Information

Journal Title
European Physical Journal. Special Topics
Journal Volume
227
Journal Issue
15-16
Journal Page Range
p. 2315-2328
ISSN
1951-6355

INIS

Country of Publication
France
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
54090267
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
DIFFUSION; DNA; POLYMERS; TRANSCRIPTION FACTORS
Descriptors DEC
NUCLEIC ACIDS; ORGANIC COMPOUNDS; PROTEINS

Optional Information

Copyright
Copyright (c) 2019 EDP Sciences, Springer-Verlag GmbH Germany, part of Springer Nature