Published July 19, 2004
| Version v1
Journal article
Spectral entropy criteria for structural segmentation in genomic DNA sequences
Creators
Description
The spectral entropy is calculated with Fourier structure factors and characterizes the level of structural ordering in a sequence of symbols. It may efficiently be applied to the assessment and reconstruction of the modular structure in genomic DNA sequences. We present the relevant spectral entropy criteria for the local and non-local structural segmentation in DNA sequences. The results are illustrated with the model examples and analysis of intervening exon-intron segments in the protein-coding regions
Additional details
Identifiers
- DOI
- 10.1016/j.physleta.2004.05.060;
- PII
- S0375960104007844;
Publishing Information
- Journal Title
- Physics Letters. A
- Journal Volume
- 328
- Journal Issue
- 1
- Journal Page Range
- p. 79-86
- ISSN
- 0375-9601
- CODEN
- PYLAAG
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 36051824
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS; S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- DNA SEQUENCING; ENTROPY; MODULAR STRUCTURES; PROTEINS; STRUCTURE FACTORS
- Descriptors DEC
- ORGANIC COMPOUNDS; PHYSICAL PROPERTIES; STRUCTURAL CHEMICAL ANALYSIS; THERMODYNAMIC PROPERTIES
Optional Information
- Copyright
- Copyright (c) 2004 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.