Published June 2015 | Version v1
Journal article

The analysis of differential rxpression of glycyrrhiza uralensis root gene by nitrogen ions implantationbased on cDNA-AFLP method

  • 1. Key Laboratory of Ion Beam Bioengineering, Inner Mongolia Autonomous Region/College of Physical Science and Technology Inner Mongolia University, Huhhot, Inner Mongolia (China)

Description

In order to study the differential expression of gene in licorice root induced by N+ implantation, cDNA-AFLP approach was employed. Total RNA was isolated from root of licorice. synthesizing the cDNA double chain by reverse transcription, using the PstI and MseI enzymes to digest the double standed cDNA, connecting the joint, pre-amplification, selective amplification. 286 differential expression cDNA fragments were obtained with 81 selective amplification primer pairs combinations. Which accounted for 20% of the total 1576 bands. The differential cDNA fragments were eluted, cloned and sequenced. 92 fragments of cDNA were obtained, 53 pieces of which retrieved high-homology DNA or protein mRNA sequences with known function by BLAST analysis. Functional alaysis indicated that some cDNA fragments might participate in metabolism pathways, signal transduction, stress responses etc. 30 fragments were showed homolory to unknown and hypothetical function genes. (authors)

Additional details

Publishing Information

Journal Title
Journal of Nuclear Agricultural Sciences
Journal Volume
29
Journal Issue
6
Journal Page Range
p. 1074-1080
ISSN
1000-8551

INIS

Country of Publication
China
Country of Input or Organization
China
INIS RN
50035907
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
DNA; ENZYMES; GENES; ION BEAMS; MESSENGER-RNA; METABOLISM; NITROGEN IONS; PLANTS; ROOTS; TRANSCRIPTION
Descriptors DEC
BEAMS; CHARGED PARTICLES; IONS; NUCLEIC ACIDS; ORGANIC COMPOUNDS; PROTEINS; RNA

Optional Information

Notes
3 figs., 4 tabs., 28 refs.; http://dx.doi.org/10.11869/j.issn.100-8551.2015.06.1074