Published February 13, 2009 | Version v1
Journal article

Interplay of bistable kinetics of gene expression during cellular growth

  • 1. Boreskov Institute of Catalysis, Russian Academy of Sciences, Novosibirsk 630090 (Russian Federation)
  • 2. Department of Applied Physics, Chalmers University of Technology, S-412 96 Goeteborg (Sweden)

Description

In cells, the bistable kinetics of gene expression can be observed on the level of (i) one gene with positive feedback between protein and mRNA production, (ii) two genes with negative mutual feedback between protein and mRNA production, or (iii) in more complex cases. We analyse the interplay of two genes of type (ii) governed by a gene of type (i) during cellular growth. In particular, using kinetic Monte Carlo simulations, we show that in the case where gene 1, operating in the bistable regime, regulates mutually inhibiting genes 2 and 3, also operating in the bistable regime, the latter genes may eventually be trapped either to the state with high transcriptional activity of gene 2 and low activity of gene 3 or to the state with high transcriptional activity of gene 3 and low activity of gene 2. The probability to get to one of these states depends on the values of the model parameters. If genes 2 and 3 are kinetically equivalent, the probability is equal to 0.5. Thus, our model illustrates how different intracellular states can be chosen at random with predetermined probabilities. This type of kinetics of gene expression may be behind complex processes occurring in cells, e.g., behind the choice of the fate by stem cells

Availability note (English)

Available from http://dx.doi.org/10.1088/1751-8113/42/6/065102

Additional details

Identifiers

DOI
10.1088/1751-8113/42/6/065102;
PII
S1751-8113(09)86442-1;

Publishing Information

Journal Title
Journal of Physics. A, Mathematical and Theoretical (Online)
Journal Volume
42
Journal Issue
6
Journal Page Range
[8 p.]
ISSN
1751-8121

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
40074925
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
COMPUTERIZED SIMULATION; FEEDBACK; GENES; GROWTH; KINETICS; MONTE CARLO METHOD; PROBABILITY; PROTEINS; RANDOMNESS; STEM CELLS
Descriptors DEC
ANIMAL CELLS; CALCULATION METHODS; ORGANIC COMPOUNDS; SIMULATION; SOMATIC CELLS