Published September 1, 2021 | Version v1
Journal article

The folding space of protein β2-microglobulin is modulated by a single disulfide bridge

  • 1. Departamento de Física and BioISI - Biosystems and Integrative Sciences Institute, Faculdade de Ciências, Universidade de Lisboa, CampoGrande, Ed. C8, 1749-016 Lisboa (Portugal)

Description

Protein beta-2-microglobulin (β2m) is classically considered the causative agent of dialysis related amyloidosis, a conformational disorder that affects patients undergoing long-term hemodialysis. The wild type (WT) form, the ΔN6 structural variant, and the D76N mutant have been extensively used as model systems of β2m aggregation. In all of them, the native structure is stabilized by a disulfide bridge between the sulphur atoms of the cysteine residues 25 (at B strand) and 80 (at F strand), which has been considered fundamental in β2m fibrillogenesis. Here, we use extensive discrete molecular dynamics simulations of a full atomistic structure-based model to explore the role of this disulfide bridge as a modulator of the folding space of β2m. In particular, by considering different models for the disulfide bridge, we explore the thermodynamics of the folding transition, and the formation of intermediate states that may have the potential to trigger the aggregation cascade. Our results show that the dissulfide bridge affects folding transition and folding thermodynamics of the considered model systems, although to different extents. In particular, when the interaction between the sulphur atoms is stabilized relative to the other intramolecular interactions, or even locked (i.e. permanently established), the WT form populates an intermediate state featuring a well preserved core and two unstructured termini, which was previously detected only for the D76N mutant. The formation of this intermediate state may have important implications in our understanding of β2m fibrillogenesis. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/1478-3975/ac08ec

Additional details

Identifiers

Publishing Information

Journal Title
Physical Biology (Online)
Journal Volume
18
Journal Issue
5
Journal Page Range
[11 p.]
ISSN
1478-3975

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
53066166
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
AGGLOMERATION; CYSTEINE; DISULFIDES; INTERMEDIATE STATE; PROTEINS; SULFUR
Descriptors DEC
AMINO ACIDS; CARBOXYLIC ACIDS; ELEMENTS; NONMETALS; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC SULFUR COMPOUNDS; THIOLS