Published June 1, 2018 | Version v1
Journal article

Leveraging the nonuniform PSO network model as a benchmark for performance evaluation in community detection and link prediction

  • 1. Biomedical Cybernetics Group, Biotechnology Center (BIOTEC), Center for Molecular and Cellular Bioengineering (CMCB), Center for Systems Biology Dresden - CSBD, Department of Physics, Technische Universität Dresden, Tatzberg 47/49, D-01307 Dresden (Germany)

Description

Advances in network geometry pointed out that structural properties observed in networks derived from real complex systems can emerge in the hyperbolic space (HS). The nonuniform popularity-similarity-optimization (nPSO) is a generative model recently introduced in order to grow random geometric graphs in the HS, reproducing networks that have realistic features such as high clustering, small-worldness, scale-freeness and rich-clubness, with the additional possibility to control the community organization. Generative models allowing to tune the structural properties of 'realistic' synthetic networks are fundamental, because they offer a ground truth to investigate how predictive algorithms react to controlled topological variations. Here, we discuss how to leverage the nPSO model as a synthetic benchmark to compare the performance of methods for community detection and link prediction; and we prove that the nPSO offers a reliable and realistic testing framework which can complement other existing benchmarks not based on latent geometry. Furthermore, we confirm that network embedding information can improve community detection, whereas boosting link prediction in HS still needs further investigations. Indeed, we find that the presence of communities in nPSO significantly modifies the performance of link predictors and is fundamental for the reproducibility of results observed on real networks. The nPSO can trigger valuable insights to understand the intrinsic rules of link-growth and self-organization that connect topology to geometry and that are encoded in link prediction algorithms differentiating their performance. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/1367-2630/aac6f9

Additional details

Identifiers

Publishing Information

Journal Title
New Journal of Physics
Journal Volume
20
Journal Issue
6
Journal Page Range
[22 p.]
ISSN
1367-2630

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
52034901
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
ALGORITHMS; BENCHMARKS; DETECTION; FORECASTING; GEOMETRY; GRAPH THEORY; GROUND TRUTH MEASUREMENTS; OPTIMIZATION; PERFORMANCE; RANDOMNESS; SPACE; TESTING; TOPOLOGY
Descriptors DEC
MATHEMATICAL LOGIC; MATHEMATICS