Published June 2010 | Version v1
Journal article

Automated solvent artifact removal and base plane correction of multidimensional NMR protein spectra by AUREMOL-SSA

  • 1. University of Regensburg, Institute of Biophysics and Physical Biochemistry (Germany)
  • 2. University of Aveiro, Department Electrical Engineering, Telecommunications and Informatics (Portugal)
  • 3. BioSpin GmbH, Software Department (Germany)

Description

Strong solvent signals lead to a disappearance of weak protein signals close to the solvent resonance frequency and to base plane variations all over the spectrum. AUREMOL-SSA provides an automated approach for solvent artifact removal from multidimensional NMR protein spectra. Its core algorithm is based on singular spectrum analysis (SSA) in the time domain and is combined with an automated base plane correction in the frequency domain. The performance of the method has been tested on synthetic and experimental spectra including two-dimensional NOESY and TOCSY spectra and a three-dimensional 1H,13C-HCCH-TOCSY spectrum. It can also be applied to frequency domain spectra since an optional inverse Fourier transformation is included in the algorithm.

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
47
Journal Issue
2
Journal Page Range
p. 101-111
ISSN
0925-2738

Optional Information

Copyright
Copyright (c) 2010 Springer Science+Business Media B.V.