Preliminary X-ray crystallographic analysis of the catalytic domain of prophenoloxidase activating factor-I
- 1. College of Pharmacy and Research Institute for Drug Development, Pusan National University, Jangjeon-dong, Geumjeong-gu, Busan 609-735 (Korea, Republic of)
Description
Prophenoloxidase (proPO) activating factor-I (PPAF-I) is a catalytically active clip-domain SP, cleaves which proPO. The results of crystallization and preliminary X-ray analysis of the SP domain of PPAF-I are reported here. Clip-domain serine proteases (SPs) have been identified in invertebrates as crucial enzymes that are involved in diverse extracellular signalling pathways. Prophenoloxidase (proPO) activating factor-I (PPAF-I), a catalytically active clip-domain SP, cleaves proPO. To date, no crystal structures of a catalytically active clip-domain SP have been determined. Here, the results of crystallization and preliminary X-ray analysis of the SP domain of PPAF-I are reported. The crystal of the PPAF-I SP domain was obtained using the hanging-drop vapour-diffusion method in a precipitant solution containing 0.15 M lithium sulfate, 30% polyethylene glycol 4000 and 0.1 M Tris–HCl pH 8.0. The crystal diffracts X-rays to 1.7 Å resolution using a synchrotron-radiation source. The crystal belongs to space group P212121, with one molecule in the asymmetric unit and unit-cell parameters a = 38.3, b = 53.3, c = 116.6 Å, α = β = γ = 90°. A molecular-replacement solution has been found using kallikrein as a starting model, resulting in an interpretable electron-density map
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309106025851; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242929Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242929;
- DOI
- 10.1107/S1744309106025851;
- PII
- S1744309106025851;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 62
- Journal Issue
- Pt 8
- Journal Page Range
- p. 771-773
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46065465
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- CRYSTAL STRUCTURE; CRYSTALLIZATION; CRYSTALS; DENSITY; DIFFUSION; ELECTRON DENSITY; MATHEMATICAL SOLUTIONS; MOLECULES; RESOLUTION; SOLUTIONS; SPACE GROUPS
- Descriptors DEC
- DISPERSIONS; HOMOGENEOUS MIXTURES; MIXTURES; PHASE TRANSFORMATIONS; PHYSICAL PROPERTIES; SYMMETRY GROUPS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2006
- Notes
- PMCID: PMC2242929; PMID: 16880553; PUBLISHER-ID: mp5008; OAI: oai:pubmedcentral.nih.gov:2242929