A fluctuating boundary integral method for Brownian suspensions
- 1. Courant Institute of Mathematical Sciences, New York University, 251 Mercer Street, New York, NY (United States)
- 2. Center for Computational Biology, Flatiron Institute, New York, NY (United States)
- 3. Applied Mathematics Program, Yale University, New Haven, CT 06511 (United States)
- 4. Department of Mathematics, Imperial College London, London SW7 2AZ (United Kingdom)
Description
We present a fluctuating boundary integral method (FBIM) for overdamped Brownian Dynamics (BD) of two-dimensional periodic suspensions of rigid particles of complex shape immersed in a Stokes fluid. We develop a novel approach for generating Brownian displacements that arise in response to the thermal fluctuations in the fluid. Our approach relies on a first-kind boundary integral formulation of a mobility problem in which a random surface velocity is prescribed on the particle surface, with zero mean and covariance proportional to the Green's function for Stokes flow (Stokeslet). This approach yields an algorithm that scales linearly in the number of particles for both deterministic and stochastic dynamics, handles particles of complex shape, achieves high order of accuracy, and can be generalized to three dimensions and other boundary conditions. We show that Brownian displacements generated by our method obey the discrete fluctuation–dissipation balance relation (DFDB). Based on a recently-developed Positively Split Ewald method Fiore et al. (2017) [24], near-field contributions to the Brownian displacements are efficiently approximated by iterative methods in real space, while far-field contributions are rapidly generated by fast Fourier-space methods based on fluctuating hydrodynamics. FBIM provides the key ingredient for time integration of the overdamped Langevin equations for Brownian suspensions of rigid particles. We demonstrate that FBIM obeys DFDB by performing equilibrium BD simulations of suspensions of starfish-shaped bodies using a random finite difference temporal integrator.
Availability note (English)
Available from http://dx.doi.org/10.1016/j.jcp.2018.08.021Additional details
Identifiers
- DOI
- 10.1016/j.jcp.2018.08.021;
- PII
- S0021999118305448;
Publishing Information
- Journal Title
- Journal of Computational Physics (Print)
- Journal Volume
- 374
- Journal Page Range
- p. 1094-1119
- ISSN
- 0021-9991
- CODEN
- JCTPAH
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 52118771
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Descriptors DEI
- ALGORITHMS; APPROXIMATIONS; BOUNDARY CONDITIONS; FLUCTUATIONS; FLUIDS; HYDRODYNAMICS; INTEGRALS; ITERATIVE METHODS; LANGEVIN EQUATION; PARTICLES; PERIODICITY; RANDOMNESS; SIMULATION; STOCHASTIC PROCESSES; SUSPENSIONS; TWO-DIMENSIONAL SYSTEMS; VELOCITY
- Descriptors DEC
- CALCULATION METHODS; CRYSTAL LATTICES; CRYSTAL STRUCTURE; DISPERSIONS; EQUATIONS; FLUID MECHANICS; MATHEMATICAL LOGIC; MECHANICS; VARIATIONS
Optional Information
- Copyright
- Copyright (c) 2018 Elsevier Inc. All rights reserved.