Published March 2008 | Version v1
Journal article

Fractal aspects of calcium binding protein structures

  • 1. West University of Timisoara, Department of Chemistry, Pestalozzi 16, 300115 Timisoara (Romania)
  • 2. INSERM U759/Institute Curie-Recherche, Centre Universitaire Paris-Sud, Batiment 112, 91405 Orsay (France)

Description

The structures of EF-hand calcium binding proteins may be classified into two distinct groups: extended and compact structures. In this paper we studied 20 different structures of calcium binding proteins using the fractal analysis. Nine structures show extended shapes, one is semi-compact and the other 10 have compact shapes. Our study reveals different fractal characteristics for protein backbones belonging to different structural classes and these observations may be correlated to the physicochemical forces governing the protein folding

Availability note (English)

Available from http://dx.doi.org/10.1016/j.chaos.2006.05.098

Additional details

Identifiers

DOI
10.1016/j.chaos.2006.05.098;
PII
S0960-0779(06)00543-1;

Publishing Information

Journal Title
Chaos, Solitons and Fractals
Journal Volume
35
Journal Issue
5
Journal Page Range
p. 960-966
ISSN
0960-0779

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
39048086
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
CALCIUM; FRACTALS; MATHEMATICAL MODELS; PROTEIN STRUCTURE; PROTEINS
Descriptors DEC
ALKALINE EARTH METALS; ELEMENTS; METALS; ORGANIC COMPOUNDS

Optional Information

Copyright
Copyright (c) 2006 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.