Electronic transport in double-strand poly(dG)-poly(dC) DNA segments
- 1. Departamento de Fisica, Universidade Federal do Rio Grande do Norte, 59072-970 Natal, RN (Brazil)
- 2. Departamento de Biofisica e Farmacologia, Universidade Federal do Rio Grande do Norte, 59072-970 Natal, RN (Brazil)
- 3. Department of Physics and Astronomy, University of Southern California, Los Angeles, CA 90089 (United States)
Description
We study the electronic properties of a double-strand quasiperiodic DNA molecule modeled by a one-dimensional effective Hamiltonian, which includes contributions from the nucleobasis system as well as the sugar-phosphate backbone. Our theoretical approach makes use of Dyson's equation together with a transfer-matrix treatment, considering an electronic tight-binding Hamiltonian model to investigate the electronic density of states (DOS) and the electronic transmissivity of sequences of DNA finite segments. To mimic the DNA segments, we consider the finite quasiperiodic sequences of Fibonacci's type, in a poly(dG)-poly(dC) configuration, whose building blocks are the bases guanine G and cytosine C. We compared the electronic transport found for the quasiperiodic structure to those using a sequence of natural DNA, as part of the human chromosome Ch22.
Availability note (English)
Available from http://dx.doi.org/10.1016/j.physleta.2009.02.043Additional details
Identifiers
- DOI
- 10.1016/j.physleta.2009.02.043;
- PII
- S0375-9601(09)00230-8;
Publishing Information
- Journal Title
- Physics Letters. A
- Journal Volume
- 373
- Journal Issue
- 16
- Journal Page Range
- p. 1486-1491
- ISSN
- 0375-9601
- CODEN
- PYLAAG
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 41059480
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Descriptors DEI
- CHARGED-PARTICLE TRANSPORT; CONFIGURATION; CYTOSINE; DNA; EQUATIONS; GUANINE; HAMILTONIANS; HUMAN CHROMOSOMES; MATRICES; ONE-DIMENSIONAL CALCULATIONS; PHOSPHATES; SACCHAROSE
- Descriptors DEC
- AMINES; AROMATICS; AZAARENES; AZINES; CARBOHYDRATES; CHROMOSOMES; DISACCHARIDES; HETEROCYCLIC COMPOUNDS; HYDROXY COMPOUNDS; MATHEMATICAL OPERATORS; NUCLEIC ACIDS; OLIGOSACCHARIDES; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; ORGANIC OXYGEN COMPOUNDS; OXYGEN COMPOUNDS; PHOSPHORUS COMPOUNDS; PURINES; PYRIMIDINES; QUANTUM OPERATORS; RADIATION TRANSPORT; SACCHARIDES
Optional Information
- Copyright
- Copyright (c) 2009 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.