13C-detected HN(CA)C and HMCMC experiments using a single methyl-reprotonated sample for unambiguous methyl resonance assignment
Creators
- 1. National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Laboratory of Chemical Physics (United States)
Description
Methyl groups provide an important source of structural and dynamic information in NMR studies of proteins and their complexes. For this purpose sequence-specific assignments of methyl 1H and 13C resonances are required. In this paper we propose the use of 13C-detected 3D HN(CA)C and HMCMC experiments for assignment of methyl 1H and 13C resonances using a single selectively methyl protonated, perdeuterated and 13C/15N-labeled sample. The high resolution afforded in the 13C directly-detected dimension allows one to rapidly and unambiguously establish correlations between backbone HN strips from the 3D HN(CA)C spectrum and methyl group HmCm strips from the HMCMC spectrum by aligning all possible side-chain carbon chemical shifts and their multiplet splitting patterns. The applicability of these experiments for the assignment of methyl 1H and 13C resonances is demonstrated using the 18.6 kDa B domain of the Escherichia coli mannose transporter (IIBMannose)
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 36
- Journal Issue
- 4
- Journal Page Range
- p. 259-266
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 39115766
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- CARBON 13; CHEMICAL SHIFT; ESCHERICHIA COLI; HYDROGEN 1; MANNOSE; NITROGEN 15; NMR SPECTRA; NUCLEAR MAGNETIC RESONANCE; PROTEINS
- Descriptors DEC
- ALDEHYDES; BACTERIA; CARBOHYDRATES; CARBON ISOTOPES; EVEN-ODD NUCLEI; HEXOSES; HYDROGEN ISOTOPES; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; MICROORGANISMS; MONOSACCHARIDES; NITROGEN ISOTOPES; NUCLEI; ODD-EVEN NUCLEI; ORGANIC COMPOUNDS; RESONANCE; SACCHARIDES; SPECTRA; STABLE ISOTOPES
Optional Information
- Copyright
- Copyright (c) 2006 Springer Science+Business Media B.V.