Published March 2017 | Version v1
Journal article

Cross-correlated relaxation rates between protein backbone H–X dipolar interactions

Creators

  • 1. University of Colorado Denver, Department of Biochemistry and Molecular Genetics (United States)

Description

The relaxation interference between dipole–dipole interactions of two separate spin pairs carries structural and dynamics information. In particular, when compared to individual dynamic behavior of those spin pairs, such cross-correlated relaxation (CCR) rates report on the correlation between the spin pairs. We have recently mapped out correlated motion along the backbone of the protein GB3, using CCR rates among and between consecutive HN–N and Hα–Cα dipole–dipole interactions. Here, we provide a detailed account of the measurement of the four types of CCR rates. All rates were obtained from at least two different pulse sequences, of which the yet unpublished ones are presented. Detailed comparisons between the different methods and corrections for unwanted pathways demonstrate that the averaged CCR rates are highly accurate and precise with errors of 1.5–3% of the entire value ranges.

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
67
Journal Issue
3
Journal Page Range
p. 211-232
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
48092851
Subject category
S62: RADIOLOGY AND NUCLEAR MEDICINE;
Descriptors DEI
COMPARATIVE EVALUATIONS; CORRECTIONS; CORRELATIONS; DIPOLES; ERRORS; HYDROGEN IONS 1 MINUS; INTERACTIONS; PROTEINS; RELAXATION; SPIN
Descriptors DEC
ANGULAR MOMENTUM; ANIONS; CHARGED PARTICLES; EVALUATION; HYDROGEN IONS; IONS; MULTIPOLES; ORGANIC COMPOUNDS; PARTICLE PROPERTIES

Optional Information

Copyright
Copyright (c) 2017 Springer Science+Business Media Dordrecht