Published September 2009 | Version v1
Journal article

Topological and entropic repulsion in biopolymers

  • 1. Dipartimento di Fisica, INFN Sezione di Padova, Università di Padova, Via Marzolo 8, I-35131 Padova (Italy)
  • 2. SUPA, School of Physics, University of Edinburgh, Mayfield Road, Edinburgh EH9 3JZ (United Kingdom)

Description

We estimate numerically the entropic repulsion felt by two or more approaching polymers with fixed topology. Our results complement field theory estimates valid for infinitely long chains. For two loops, the steric contributions to repulsion outweigh the topological one. When many loops come together, the entropy loss scales nonlinearly with their number. This could set a thermodynamic size for a 'rosette', a putative organizing motif of interphase chromosomes. (letter)

Availability note (English)

Available from http://dx.doi.org/10.1088/1742-5468/2009/09/L09002

Additional details

Identifiers

DOI
10.1088/1742-5468/2009/09/L09002;
PII
S1742-5468(09)28231-8;

Publishing Information

Journal Title
Journal of Statistical Mechanics
Journal Volume
2009
Journal Issue
09
Journal Page Range
[11 p.]
ISSN
1742-5468

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
45034833
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
CHROMOSOMES; ENTROPY; LOSSES; NONLINEAR PROBLEMS; ORGANIZING; POLYMERS; TOPOLOGY
Descriptors DEC
MATHEMATICS; PHYSICAL PROPERTIES; THERMODYNAMIC PROPERTIES