Published December 1, 2017 | Version v1
Journal article

Force signature of the unzipping transition for strip confined two-dimensional polymers

  • 1. School of Mathematics and Statistics, The University of Melbourne, Victoria 3010 (Australia)
  • 2. Department of Mathematics, University of British Columbia, Vancouver V6T 1Z2, British Columbia (Canada)

Description

We find and analyse the exact solution of two friendly walks, modelling polymers, confined between two parallel walls in a two-dimensional strip (or slit) where the polymers interact with each other via an attractive contact interaction. In the bulk, where the polymers are always far from any walls, there is an unzipping transition between phases where the two walks drift away for low attractive fugacity (high temperatures) and bind together for high attractive fugacities (low temperatures). Previously this has been used to model the denaturation of DNA. In a strip the transition is not sharp. However, we demonstrate that there is an abrupt change in the repulsive force exerted on the walls of the strip that can be calculated exactly. We suggest that this change in the force could be exploited to provide an experimental signature of the unzipping transition. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/1751-8121/aa9105

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Physics. A, Mathematical and Theoretical (Online)
Journal Volume
50
Journal Issue
48
Journal Page Range
[24 p.]
ISSN
1751-8121

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
52020847
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
DNA; EXACT SOLUTIONS; INTERACTIONS; POLYMERS; SIMULATION; TWO-DIMENSIONAL CALCULATIONS
Descriptors DEC
MATHEMATICAL SOLUTIONS; NUCLEIC ACIDS; ORGANIC COMPOUNDS