Published September 2012 | Version v1
Journal article

A population-level model from the microscopic dynamics in Escherichia coli chemotaxis via Langevin approximation

  • 1. State Key Laboratory for Mesoscopic Physics, School of Physics, Peking University, Beijing 100871 (China)
  • 2. BM T. J. Watson Research Center, Yorktown Heights, New York 10598 (United States)

Description

Recent extensive studies of Escherichia coli (E. coli) chemotaxis have achieved a deep understanding of its microscopic control dynamics. As a result, various quantitatively predictive models have been developed to describe the chemotactic behavior of E. coli motion. However, a population-level partial differential equation (PDE) that rationally incorporates such microscopic dynamics is still insufficient. Apart from the traditional Keller–Segel (K–S) equation, many existing population-level models developed from the microscopic dynamics are integro-PDEs. The difficulty comes mainly from cell tumbles which yield a velocity jumping process. Here, we propose a Langevin approximation method that avoids such a difficulty without appreciable loss of precision. The resulting model not only quantitatively reproduces the results of pathway-based single-cell simulators, but also provides new inside information on the mechanism of E. coli chemotaxis. Our study demonstrates a possible alternative in establishing a simple population-level model that allows for the complex microscopic mechanisms in bacterial chemotaxis

Availability note (English)

Available from http://dx.doi.org/10.1088/1674-1056/21/9/098701

Additional details

Publishing Information

Journal Title
Chinese Physics. B
Journal Volume
21
Journal Issue
9
Journal Page Range
[11 p.]
ISSN
1674-1056