Published September 25, 2006 | Version v1
Journal article

Kernel method for clustering based on optimal target vector

  • 1. Istituto Nazionale di Fisica Nucleare, Sezione di Bari (Italy)
  • 2. Dipartimento Interateneo di Fisica, Bari (Italy)
  • 3. TIRES-Center of Innovative Technologies for Signal Detection and Processing, Universita di Bari (Italy)
  • 4. TIRES-Center of Innovative Technologies for Signal Detection and Processing, Universita di Bari (Italy) and Dipartimento Interateneo di Fisica, Bari (Italy) and Istituto Nazionale di Fisica Nucleare, Sezione di Bari (Italy)

Description

We introduce Ising models, suitable for dichotomic clustering, with couplings that are (i) both ferro- and anti-ferromagnetic (ii) depending on the whole data-set and not only on pairs of samples. Couplings are determined exploiting the notion of optimal target vector, here introduced, a link between kernel supervised and unsupervised learning. The effectiveness of the method is shown in the case of the well-known iris data-set and in benchmarks of gene expression levels, where it works better than existing methods for dichotomic clustering

Additional details

Identifiers

DOI
10.1016/j.physleta.2006.04.086;
arXiv
arXiv:cond-mat/0511630v1;
PII
S0375-9601(06)00662-1;

Publishing Information

Journal Title
Physics Letters. A
Journal Volume
357
Journal Issue
6
Journal Page Range
p. 413-416
ISSN
0375-9601
CODEN
PYLAAG

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
38067129
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
BENCHMARKS; ISING MODEL; KERNELS; LEARNING; VECTORS
Descriptors DEC
CRYSTAL MODELS; MATHEMATICAL MODELS; TENSORS

Optional Information

Copyright
Copyright (c) 2006 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.