Published December 1, 2016
| Version v1
Journal article
Effects of cell cycle noise on excitable gene circuits
- 1. Department of Mathematics, University of Dayton (United States)
- 2. Department of Mathematics, University of Houston (United States)
- 3. Department of Biosciences and Department of Bioengineering, Rice University (United States)
Description
We assess the impact of cell cycle noise on gene circuit dynamics. For bistable genetic switches and excitable circuits, we find that transitions between metastable states most likely occur just after cell division and that this concentration effect intensifies in the presence of transcriptional delay. We explain this concentration effect with a three-states stochastic model. For genetic oscillators, we quantify the temporal correlations between daughter cells induced by cell division. Temporal correlations must be captured properly in order to accurately quantify noise sources within gene networks. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/1478-3975/13/6/066007Additional details
Identifiers
Publishing Information
- Journal Title
- Physical Biology (Online)
- Journal Volume
- 13
- Journal Issue
- 6
- Journal Page Range
- [13 p.]
- ISSN
- 1478-3975
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 50001278
- Subject category
- S60: APPLIED LIFE SCIENCES; S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Descriptors DEI
- ABUNDANCE; CELL CYCLE; CELL DIVISION; CONCENTRATION RATIO; CORRELATIONS; ECOLOGICAL CONCENTRATION; GENES; GENETICS; METASTABLE STATES; NOISE; STOCHASTIC PROCESSES
- Descriptors DEC
- BIOLOGY; DIMENSIONLESS NUMBERS; ENERGY LEVELS; EXCITED STATES