Published December 1, 2016 | Version v1
Journal article

Effects of cell cycle noise on excitable gene circuits

  • 1. Department of Mathematics, University of Dayton (United States)
  • 2. Department of Mathematics, University of Houston (United States)
  • 3. Department of Biosciences and Department of Bioengineering, Rice University (United States)

Description

We assess the impact of cell cycle noise on gene circuit dynamics. For bistable genetic switches and excitable circuits, we find that transitions between metastable states most likely occur just after cell division and that this concentration effect intensifies in the presence of transcriptional delay. We explain this concentration effect with a three-states stochastic model. For genetic oscillators, we quantify the temporal correlations between daughter cells induced by cell division. Temporal correlations must be captured properly in order to accurately quantify noise sources within gene networks. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/1478-3975/13/6/066007

Additional details

Publishing Information

Journal Title
Physical Biology (Online)
Journal Volume
13
Journal Issue
6
Journal Page Range
[13 p.]
ISSN
1478-3975

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
50001278
Subject category
S60: APPLIED LIFE SCIENCES; S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
ABUNDANCE; CELL CYCLE; CELL DIVISION; CONCENTRATION RATIO; CORRELATIONS; ECOLOGICAL CONCENTRATION; GENES; GENETICS; METASTABLE STATES; NOISE; STOCHASTIC PROCESSES
Descriptors DEC
BIOLOGY; DIMENSIONLESS NUMBERS; ENERGY LEVELS; EXCITED STATES