Inelastic neutron scattering and DFT study of 2-amino-3-hydroxymethyl-1,3-propane diol (TRIS)
Creators
- 1. Institute of Inorganic Chemistry, Slovak Academy of Sciences, Dubravska Cesta 9, SK-845 36 Bratislava (Slovakia)
- 2. Institute of Theoretical Chemistry, University of Vienna, Waehringerstrasse 17, A-1090 Vienna (Austria)
- 3. Intense Pulsed Neutron Source Division, Argonne National Laboratory, 9700 S. Cass Avenue, Argonne, IL 60439 (United States)
Description
We report an inelastic neutron scattering (INS) study of 2-amino-3-hydroxymethyl-1,3-propane diol (TRIS). The assignment of the experimental vibrational spectra measured using several incident neutrons' energies on HRMECS spectrometer has been made by means of DFT calculations. To simulate crystal environment both molecular cluster and solid state models were used. The study has been completed by an alternative approach, molecular dynamics (MD) calculations, done at the same level of the DFT theory. The INS spectra calculated with the solid state models (normal mode analysis, and MD) gave a better fit of the experiment than the cluster model. On the other hand, the peaks between 650 and 850 cm-1 in the experimental INS spectra assigned to OH torsional modes were reproduced better by the cluster calculations. The nature of the stretching frequency of unusually long O-H bond (1.012 A) was interpreted by means of MD calculations. The interpretation of the spectrum below 100 cm-1 was based on Fourier transform of the velocity autocorrelation function of centre of mass of a molecule of TRIS
Availability note (English)
Available from http://dx.doi.org/10.1016/j.chemphys.2007.08.027Additional details
Identifiers
- DOI
- 10.1016/j.chemphys.2007.08.027;
- PII
- S0301-0104(07)00383-7;
Publishing Information
- Journal Title
- Chemical Physics
- Journal Volume
- 340
- Journal Issue
- 1-3
- Journal Page Range
- p. 245-259
- ISSN
- 0301-0104
- CODEN
- CMPHC2
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 39094645
- Subject category
- S74: ATOMIC AND MOLECULAR PHYSICS;
- Descriptors DEI
- CENTER-OF-MASS SYSTEM; CLUSTER MODEL; CRYSTALS; FOURIER TRANSFORMATION; GLYCOLS; INELASTIC SCATTERING; MOLECULAR CLUSTERS; MOLECULAR DYNAMICS METHOD; NEUTRON DIFFRACTION; NEUTRON REACTIONS; NEUTRONS; NORMAL-MODE ANALYSIS; PROPANE; SPECTRA; SPECTROMETERS
- Descriptors DEC
- ALCOHOLS; ALKANES; BARYON REACTIONS; BARYONS; CALCULATION METHODS; COHERENT SCATTERING; DIFFRACTION; ELEMENTARY PARTICLES; FERMIONS; HADRON REACTIONS; HADRONS; HYDROCARBONS; HYDROXY COMPOUNDS; INTEGRAL TRANSFORMATIONS; MATHEMATICAL MODELS; MEASURING INSTRUMENTS; NUCLEAR MODELS; NUCLEAR REACTIONS; NUCLEON REACTIONS; NUCLEONS; ORGANIC COMPOUNDS; SCATTERING; TRANSFORMATIONS
Optional Information
- Copyright
- Copyright (c) 2007 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.