Published June 23, 2005 | Version v1
Journal article

The structure at 1.7 Å resolution of the protein product of the At2g17340 gene from Arabidopsis thaliana

  • 1. Center for Eukaryotic Structural Genomics, Department of Biochemistry, University of Wisconsin-Madison (United States)

Description

The crystal structure of the 40.8 kDa At2g17340 protein from A. thaliana was determined at 1.7 Å resolution. The structure provides the first insight into the structural organization of the Pfam01937.11 family and establishes that the proteins of this family coordinate a metal in its putative active site. The crystal structure of the At2g17340 protein from A. thaliana was determined by the multiple-wavelength anomalous diffraction method and was refined to an R factor of 16.9% (Rfree = 22.1%) at 1.7 Å resolution. At2g17340 is a member of the Pfam01937.11 protein family and its structure provides the first insight into the structural organization of this family. A number of fully and highly conserved residues defined by multiple sequence alignment of members of the Pfam01937.11 family were mapped onto the structure of At2g17340. The fully conserved residues are involved in the coordination of a metal ion and in the stabilization of loops surrounding the metal site. Several additional highly conserved residues also map into the vicinity of the metal-binding site, while others are clearly involved in stabilizing the hydrophobic core of the protein. The structure of At2g17340 represents a new fold in protein conformational space

Availability note (English)

Available from http://dx.doi.org/10.1107/S1744309105017690; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1952457

Additional details

Publishing Information

Journal Title
Acta Crystallographica. Section F
Journal Volume
61
Journal Issue
Pt 7
Journal Page Range
p. 630-635
ISSN
1744-3091
CODEN
ACSFCL

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
46061317
Subject category
S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
Descriptors DEI
ALIGNMENT; CRYSTAL STRUCTURE; IONS; METALS; PROTEINS; R FACTORS; RESOLUTION; STABILIZATION; WAVELENGTHS
Descriptors DEC
CHARGED PARTICLES; ELEMENTS; ORGANIC COMPOUNDS

Optional Information

Copyright
Copyright (c) International Union of Crystallography 2005
Notes
PMCID: PMC1952457; PMID: 16511115; PUBLISHER-ID: gx5063; OAI: oai:pubmedcentral.nih.gov:1952457