Published June 30, 2005 | Version v1
Journal article

The first crystal structure of an archaeal helical repeat protein

  • 1. Department of Biological Science and Technology, Faculty of Engineering, University of Tokushima, Tokushima 770-8506 (Japan)
  • 2. Institute for Health Sciences, Tokushima Bunri University, Tokushima 770-8514 (Japan)
  • 3. Department of Biology, Graduate School of Science, Osaka University (Japan)
  • 4. Graduate School of Information Science, Nara Institute of Science and Technology, Ikoma, Nara 630-0101 (Japan)

Description

The crystal structure of ST1625p, a protein encoded by a hypothetical open reading frame ST1625 in the genome of the hyperthermophilic archaeon Sulfolobus tokodaii, was determined at 2.2 Å resolution. The structure of ST1625p consists of a unique superhelix with a low-level structure resemblance to doamins from other proteins with known three-dimensional structures. The crystal structure of ST1625p, a protein encoded by a hypothetical open reading frame ST1625 in the genome of the hyperthermophilic archaeon Sulfolobus tokodaii, was determined at 2.2 Å resolution. The only sequence similarity exhibited by the amino-acid sequence of ST1625p was a 33% identity with the sequence of SSO0983p from S. solfataricus. The 19 kDa monomeric protein was observed to consist of a right-handed superhelix assembled from a tandem repeat of ten α-helices. A structural homology search using the DALI and MATRAS algorithms indicates that this protein can be classified as a helical repeat protein

Availability note (English)

Available from http://dx.doi.org/10.1107/S1744309105019263; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1952456

Additional details

Publishing Information

Journal Title
Acta Crystallographica. Section F
Journal Volume
61
Journal Issue
Pt 7
Journal Page Range
p. 636-639
ISSN
1744-3091
CODEN
ACSFCL

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
46061316
Subject category
S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
Descriptors DEI
ALGORITHMS; CRYSTAL STRUCTURE; PROTEINS; RESOLUTION
Descriptors DEC
MATHEMATICAL LOGIC; ORGANIC COMPOUNDS

Optional Information

Copyright
Copyright (c) International Union of Crystallography 2005
Notes
PMCID: PMC1952456; PMID: 16511116; PUBLISHER-ID: tb5001; OAI: oai:pubmedcentral.nih.gov:1952456