The first crystal structure of an archaeal helical repeat protein
Creators
- 1. Department of Biological Science and Technology, Faculty of Engineering, University of Tokushima, Tokushima 770-8506 (Japan)
- 2. Institute for Health Sciences, Tokushima Bunri University, Tokushima 770-8514 (Japan)
- 3. Department of Biology, Graduate School of Science, Osaka University (Japan)
- 4. Graduate School of Information Science, Nara Institute of Science and Technology, Ikoma, Nara 630-0101 (Japan)
Description
The crystal structure of ST1625p, a protein encoded by a hypothetical open reading frame ST1625 in the genome of the hyperthermophilic archaeon Sulfolobus tokodaii, was determined at 2.2 Å resolution. The structure of ST1625p consists of a unique superhelix with a low-level structure resemblance to doamins from other proteins with known three-dimensional structures. The crystal structure of ST1625p, a protein encoded by a hypothetical open reading frame ST1625 in the genome of the hyperthermophilic archaeon Sulfolobus tokodaii, was determined at 2.2 Å resolution. The only sequence similarity exhibited by the amino-acid sequence of ST1625p was a 33% identity with the sequence of SSO0983p from S. solfataricus. The 19 kDa monomeric protein was observed to consist of a right-handed superhelix assembled from a tandem repeat of ten α-helices. A structural homology search using the DALI and MATRAS algorithms indicates that this protein can be classified as a helical repeat protein
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309105019263; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1952456Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1952456;
- DOI
- 10.1107/S1744309105019263;
- PII
- S1744309105019263;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 61
- Journal Issue
- Pt 7
- Journal Page Range
- p. 636-639
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46061316
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- ALGORITHMS; CRYSTAL STRUCTURE; PROTEINS; RESOLUTION
- Descriptors DEC
- MATHEMATICAL LOGIC; ORGANIC COMPOUNDS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2005
- Notes
- PMCID: PMC1952456; PMID: 16511116; PUBLISHER-ID: tb5001; OAI: oai:pubmedcentral.nih.gov:1952456