Published May 2019 | Version v1
Journal article

Quenching by sodium thiosulfate does not influence 16S rRNA gene sequencing profiles of reclaimed water from three sites in the Mid-Atlantic, United States

  • 1. Maryland Institute for Applied Environmental Health, University of Maryland School of Public Health, College Park, MD (United States)
  • 2. Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD (United States)

Description

A quenching agent is commonly added to chlorinated, reclaimed water during sample collection to prevent chlorine-mediated die-off of viable microbiota. However, the effect of quenching on downstream 16S rRNA-based bacterial community analyses is unclear. We conducted a side-by-side comparison of 16S rRNA sequencing data from reclaimed water samples quenched with sodium thiosulfate and non-quenched samples. Our data showed that 16 S rRNA processing and sequencing methods, and resulting bacterial profiles, were not negatively impacted by quenching.

Additional details

Identifiers

DOI
10.1016/j.envres.2019.02.022;
PII
S0013935119300969;

Publishing Information

Journal Title
Environmental Research
Journal Volume
172
Journal Page Range
p. 296-300
ISSN
0013-9351
CODEN
ENVRAL

INIS

Country of Publication
United States
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
55026093
Subject category
S63: RADIATION, THERMAL, AND OTHER ENVIRONMENTAL POLLUTANT EFFECTS ON LIVING ORGANISMS AND BIOLOGICAL MATERIALS;
Descriptors DEI
CHLORINE; GENES; QUENCHING; SODIUM; THIOSULFATES
Descriptors DEC
ALKALI METALS; ELEMENTS; HALOGENS; METALS; NONMETALS

Optional Information

Copyright
Copyright (c) 2019 Elsevier Inc. All rights reserved.