Published May 2019
| Version v1
Journal article
Quenching by sodium thiosulfate does not influence 16S rRNA gene sequencing profiles of reclaimed water from three sites in the Mid-Atlantic, United States
Creators
- 1. Maryland Institute for Applied Environmental Health, University of Maryland School of Public Health, College Park, MD (United States)
- 2. Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD (United States)
Description
A quenching agent is commonly added to chlorinated, reclaimed water during sample collection to prevent chlorine-mediated die-off of viable microbiota. However, the effect of quenching on downstream 16S rRNA-based bacterial community analyses is unclear. We conducted a side-by-side comparison of 16S rRNA sequencing data from reclaimed water samples quenched with sodium thiosulfate and non-quenched samples. Our data showed that 16 S rRNA processing and sequencing methods, and resulting bacterial profiles, were not negatively impacted by quenching.
Additional details
Identifiers
- DOI
- 10.1016/j.envres.2019.02.022;
- PII
- S0013935119300969;
Publishing Information
- Journal Title
- Environmental Research
- Journal Volume
- 172
- Journal Page Range
- p. 296-300
- ISSN
- 0013-9351
- CODEN
- ENVRAL
INIS
- Country of Publication
- United States
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 55026093
- Subject category
- S63: RADIATION, THERMAL, AND OTHER ENVIRONMENTAL POLLUTANT EFFECTS ON LIVING ORGANISMS AND BIOLOGICAL MATERIALS;
- Descriptors DEI
- CHLORINE; GENES; QUENCHING; SODIUM; THIOSULFATES
- Descriptors DEC
- ALKALI METALS; ELEMENTS; HALOGENS; METALS; NONMETALS
Optional Information
- Copyright
- Copyright (c) 2019 Elsevier Inc. All rights reserved.