Published April 2008 | Version v1
Journal article

Structural constraints for the Crh protein from solid-state NMR experiments

  • 1. UMR 5086 C.N.R.S./Universite de Lyon, Institut de Biologie et Chimie des Proteines (France)
  • 2. Max-Planck-Institute for Biophysical Chemistry, Solid-state NMR (Germany)

Description

We demonstrate that short, medium and long-range constraints can be extracted from proton mediated, rare-spin detected correlation solid-state NMR experiments for the microcrystalline 10.4 x 2 kDa dimeric model protein Crh. Magnetization build-up curves from cross signals in NHHC and CHHC spectra deliver detailed information on side chain conformers and secondary structure for interactions between spin pairs. A large number of medium and long-range correlations can be observed in the spectra, and an analysis of the resolved signals reveals that the constraints cover the entire sequence, also including inter-monomer contacts between the two molecules forming the domain-swapped Crh dimer. Dynamic behavior is shown to have an impact on cross signals intensities, as indicated for mobile residues or regions by contacts predicted from the crystal structure, but absent in the spectra. Our work validates strategies involving proton distance measurements for large and complex proteins as the Crh dimer, and confirms the magnetization transfer properties previously described for small molecules in solid protein samples

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
40
Journal Issue
4
Journal Page Range
p. 239-250
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
40001764
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
CRYSTAL STRUCTURE; DIMERS; MAGNETIZATION; MOLECULES; NMR SPECTRA; NUCLEAR MAGNETIC RESONANCE; PROTEINS
Descriptors DEC
MAGNETIC RESONANCE; ORGANIC COMPOUNDS; RESONANCE; SPECTRA

Optional Information

Copyright
Copyright (c) 2008 Springer Science+Business Media B.V.