[en] 'Geoscientific research' performed at the Tono Geoscience Center is developing site investigation, characterization and assessment techniques for understanding of geological environment. Their important themes are to establish a methodology for analyzing uncertainties in heterogeneous geological environment, and to develop investigation techniques for reducing the uncertainties efficiently. This study proposes a new approach where all the possible options in the models and data-sets that cannot be excluded in the light of the evidence available, are identified. This approach enables uncertainties associated with the understanding at a given stage of the site characterization to be made explicitly using an uncertainty analysis technique based on Fuzzy geostatistics. This, in turn, supports the design of the following investigation stage to reduce the uncertainties efficiently. In the study, current knowledge had been compiled, and the technique had been advanced through geological modeling and groundwater analyses in the Tono area. This report systematized the uncertainty analysis methodology associated with the characterization of the geological environment, and organized the procedure of the methodology with the application examples in the study. This report also dealt with investigation techniques for reducing the uncertainties efficiently, and underground facility design options for handling geological uncertainties based on the characterization of the geological environment. (author)